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Date | Cluster | Application/Library | Module Name | Version | Action | Notes |
|---|---|---|---|---|---|---|
09/13/2022 | teton | samtools | 1.16.1 | updated | ||
09/13/2022 | teton | bcftools | bcftools | 1.16 | updated | Part of the Samtools suite of tools. |
09/13/2022 | teton | htslib | htslib | 1.16 | updated | Part of the Samtools suite of tools. |
09/01/2022 | teton | fftw | 3.3.10 | installed | Built with Nvidia HPC SDK 22.7. | |
08/22/2022 | teton | nvidia/hpc-sdk | 22.7 | updated | Built with CUDA 11.7 support. | |
08/22/2022 | teton | cuda | 11.7.1 | updated | Built with: gcc/11.2.0 | |
08/10/2022 | teton | wannier90 | 3.1.0 | installed | Built with: gcc/11.2.0 openmpi/4.1.2 netlib-lapack/3.9.1 and openblas/0.3.18 | |
08/10/2022 | teton | lammps | 20220623 | updated | Additional packages: ADIOS, ATC, DIFFRACTION, KSPACE, MANYBODY, MEAM, MOLECULE, REAXFF, REPLICA, RIGID, and VORONOI | |
8/8/2022 | teton | eddyproengine | 7.0.9 | installed | ||
7/13/2022 | wildiris | gentools | 1.0.0 | installed | A collection of the following packages: blobtools, bedtools, canu, filtlong, masurca, medaka, miniasm, minimap2, NanoPlot, pilon, porechop, racon, tabview | |
7/13/2022 | teton | tesseract | 4.1.1 | installed | ||
7/7/2022 | teton | fftw | 3.3.10 | updated | Built with gcc/11.2.0 and openmpi/4.1.2 | |
6/9/2022 | wildiris | trimmomatic | 0.40 | installed | ||
6/9/2022 | wildiris | quast | 5.0.2 | installed | ||
6/9/2022 | wildiris | orthofinder | 2.5.4 | installed | ||
6/9/2022 | wildiris | multiqc | 1.12 | installed | ||
6/9/2022 | teton | energyplus | 9.6.0 | installed | ||
6/9/2022 | wildiris | busco | 5.3.2 | installed | ||
6/9/2022 | wildiris | blobtools2 | 3.1.5 | installed | ||
6/9/2022 | wildirs | raxml | 8.2.12 | installed | ||
5/12/2022 | teton | busco | 5.3.2 | installed | ||
5/5/2022 | teton | plink | 1.9 | installed | ||
5/5/2022 | teton | matlab | 2022a | updated | ||
4/7/2022 | teton | qiime2 | 2022.2 | updated | ||
4/1/2022 | teton | matlab | 2021b | installed | ||
3/30/2022 | teton | slim | 3.7.1 | updated | ||
3/04/2022 | teton | guppy-cpu/guppy-gpu | 6.0.1 | installed | ||
2/28/2022 | teton | dftb | 21.1 | installed | Built from a specific tree branch: mdForces | |
2/23/2022 | teton | built by user | 9.0 | details | Details the steps required to build a local version. | |
2/23/2022 | teton | nextflow | 21.10.6 | installed | ||
1/22/2022 | teton | Boost: C++ Libraries | boost | 1.78.0 | updated | Built with gcc/11.2.0 |
1/18/2022 | teton | Compiler: GNU GCC | gcc | 11.2.0 | updated | |
1/11/2022 | teton | python | 3.10.1 | updated | With numpy (1.22.2) and pandas (1.4.1) | |
1/7/2022 | teton | packmol | 20.3.3 | installed | ||
11/18/2021 | teton | genemark | 4.68 | installed | ||
09/28/2021 | teton | DeepLabCut - CPU version | deeplabcut | 2.2.0.2 | installed | |
09/28/2021 | teton | megan | 6.21.12 | installed | ||
09/24/2021 | teton | miniconda3 | 4.10.3 | updated | ||
09/23/2021 | teton | mafTools, sonLib, pinchesAndCacti | maftools | 0.1 | installed | |
08/25/2021 | teton | HDF5 | hdf5 | 1.12.1 | updated | Versions: gcc/openmpi and intel/intel-mpi |
08/25/2021 | teton | singularity | 3.8.1 | updated | ||
08/19/2021 | teton | N/A | 5.5.0 | installed | Instructions to install locally. | |
08/09/2021 | teton | lammps | 20210809 | updated | Additional packages: KSPACE, MANYBODY, MOLECULE, RIGID, REPLICA, USER-ADIOS, USER-ATC, USER-DIFFRACTION, USER-MEAMC, USER-REAXC and VORONOI | |
06/15/2021 | teton | angsd | 0.935 | installed | ||
06/15/2021 | teton | samtools | 1.12 | updated | ||
06/15/2021 | teton | htslib | 1.12 | updated | ||
06/03/2021 | teton | sourcetracker2 | 2.0.1 | installed | ||
05/07/2021 | teton | qiime2 | 2021.4 | updated | ||
03/12/2021 | teton | spades | 3.15.2 | updated | ||
02/19/2021 | loren | libs/itk/5.1.2 | 5.1.2 | updated | ||
02/19/2021 | loren | libs/vtk/8.2.0 | 8.2.0 | updated | ||
02/12/2021 | teton | trees | 3 | installed | ||
01/22/2021 | teton | vsearch | 2.15.1 | updated | ||
01/16/2021 | teton | kentutils | 1.04.0 | installed | ||
15/01/2021 | teton | paraview | 5.8.1 | installed | ||
01/05/2021 | loren | apps/paraview/5.8.1 | 5.8.1 | updated | ||
12/16/2020 | teton | htseq | 0.12.4 | updated | ||
11/16/2020 | loren | apps/avizo | 2020.02 | installed | ||
11/16/2020 | loren | apps/pergeos | 2019.04 | installed | ||
11/09/2020 | teton | opensmoke | 0.11.0 | installed | ||
11/02/2020 | teton | quantum-espresso | 6.6 | installed | Uses intel and intel-mpi | |
10/28/2020 | teton | dftb | 20.1 | installed | ||
10/14/2020 | teton | cutadapt | 2.10 | updated | ||
10/08/2020 | teton | built by user | details | Master branch as off 10/08/2020 Instructions on how to build MOOSE on teton, using the petsc/3.11.4 module. | ||
10/01/2020 | teton | lammps | 20201001 | updated | Additional packages: KSPACE, MANYBODY, MOLECULE, RIGID, REPLICA, USER-ADIOS, USER-ATC, USER-MEAMC, USER-REAXC and VORONOI | |
09/01/2020 | teton | qiime2 | 2020.8 | updated | With q2-aldex2 plugin | |
07/31/2020 | teton | gatk | 4.1.8.0 | updated | ||
07/01/2020 | teton | r | 4.0.2 | updated | Built with intel compiler and MKL | |
06/24/2020 | teton | r | 4.0.2 | updated | Built with gcc/7.3.0 | |
6/22/2020 | teton | qiime2 | 2020.2b | updated | With q2-aldex2 plugin | |
6/18/2020 | teton | qiime2 | 2020.2 | updated | ||
03/25/2020 | teton | blast-plus | 2.10.0 | updated | ||
03/25/2020 | teton | lammps | 20200324 | updated | Added package RIGID | |
03/10/2020 | teton | snopt | 7.2.13 | installed | ||
03/05/2020 | teton | lammps | 20200305 | updated | Added packages KSPACE and CPM | |
02/28/2020 | teton | lammps | 20200227 | updated | added packages: MANYBODY, VORONOI, USER-ATC, USER-MEAMC and USER-ADIOS | |
02/13/2020 | teton | p7zip | p7zip/16.02 | installed | ||
02/07/2020 | teton | qiime2 | 2019.10 | updated | ||
02/05/2020 | teton | lammps | 20190807 | updated | LAMMPS (7 Aug 2019) with packages: MOLECULE and USER-REAXC | |
01/17/2020 | teton | modeltest | 0.1.6 | installed | ||
01/07/2020 | teton | ensembl-vep | 98.3 | installed | ||
12/10/2019 | teton | jdk | 11.0.5 | updated | ||
11/15/2019 | teton | rohan | 1.0.0 | installed | ||
11/15/2019 | teton | psmc | 1.0.0 | installed | ||
11/12/2019 | teton | r | 3.6.1 | updated | Built with intel compiler and MKL | |
11/05/2019 | teton | r | 3.6.1 | updated | ||
10/31/2019 | teton | denise-sh | 1.0.0 | installed | ||
10/11/2019 | teton | mummer | 4.0.0 | installed | ||
10/10/2019 | teton | kraken | 2.0.8 | updated | ||
9/26/2019 | teton | ray | 2.3.1 | installed | ||
9/23/2019 | teton | cgal | 4.6.3 | installed | Built with gcc 7.3.0 | |
9/19/2019 | teton | sava | 1.0 | installed | ||
9/18/2019 | teton | denise | 1.3 | installed | ||
9/17/2019 | teton | fftw | 3.3.8-impi | updated | Built with intel/18.0.1 and intel-mpi/2018.2.199 | |
9/16/2019 | teton | barracuda | 0.7.0 | installed | ||
9/13/2019 | teton | gpu-blast | 1.1 | installed | ||
9/12/2019 | teton | mlst | 2.0.4 | installed |
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