HISAT2
Overview
HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (whole-genome, transcriptome, and exome sequencing data) against the general human population (as well as against a single reference genome).
Using
Use the module name hisat2
to discover versions available and to load the application.
Multicore:
Both the hisat2
and hisatgenotype
can run across multiple threads using the --threads
option.
Please see the help for the specific tool’s command for further details e.g. hisat2
/ hisatgenotype --help
.