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Calling the SLiM command-line

Info

The slim command is only available from within your activated conda environment.

As soon as you deactivate it, the command is no longer available.

Code Block
(/cluster/medbow/project/arcc/salexan5/software/slim_env_4.2.2) [salexan5@mblog2 ~]$ conda install slim
(/cluster/medbow/project/arcc/salexan5/software/slim_env_4.2.2) [salexan5@mblog2 ~]$ slim --version
SLiM version 4.2.2, built May  5 2024 12:39:53
Git commit SHA-1: unknown (built from a non-Git source archive)

(/cluster/medbow/project/arcc/salexan5/software/slim_env_4.2.2) [salexan5@mblog2 ~]$ which slim
/cluster/medbow/project/arcc/salexan5/software/slim_env_4.2.2/bin/slim

(/cluster/medbow/project/arcc/salexan5/software/slim_env_4.2.2) [salexan5@mblog2 ~]$ conda deactivate

[salexan5@mblog2 ~]$ slim --version
bash: slim: command not found...

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