RAxML
Overview
RAxML (Randomized Axelerated Maximum Likelihood) is a program for sequential and parallel Maximum Likelihood based inference of large phylogenetic trees.
Using
Use the module name raxml
to discover versions available and to load the application.
Multicore/Multi node
The raxml
application has been built with MPI (openmpi
) and can run across multiple nodes, as well as across multiple cores, depending on which command you use.
View the options of whichever command you use, specifically reading about the -T
and -N
options:
Command | Functionality | Use Options: |
---|---|---|
| Single node, single core. |
|
| Single node, multiple cores. |
|
| Multiple nodes, single core per task. |
|
| Multiple nodes, multiple cores per task. |
|