HTSeq
- Simon Alexander
Owned by Simon Alexander, created
Overview
HTSeq: Analysing high-throughput sequencing data with Python.
Using
Use the module name htseq to discover versions available and to load the application.
Loading the htseq module loads a conda environment which contains its own version of Python as well as having the htseq python package available.
Multicore
Some of the htseq related commands can run across multiple cores. View their usage details to find out which, for example view htseq-count --help to view its -n / --nprocesses option.