Overview

Herein, find summaries of each package with links to a more detailed page for each package.
Below is a list of software / applications that are available on WildIris. Click the software title to learn more about a particular software package, including its associated module name to use to find available versions and to load.
Please refer to our LMOD page for information about and how to use the module system:

Last Updated: 08/25/23

application

Astral

BCFtools

Beast1

Blast+

Blobtools2

Bowtie2

Bridger

Busco

BWA

FastQC

Gentools

Guppy (CPU)

HISAT2

HTSlib

IQ-Tree

MAFFT

MultiQC

Muscle

OrthoFinder

PLINK

Prokka

Qiime2

QUAST

RAxML

RevBayes

Salmon

Samtools

Shovill

SPades

Stacks

StringTie

Trimmomatic

USearch

VCFtools

compiler

GNU

containers and virtual envs

Miniconda

language

C/C++

Fortran

Java

Perl

Python

R

libraries and toolkits

OpenMPI

utility

Ant

GSUtil