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#!/bin/bash
#SBATCH --account=type-your-project-name
#SBATCH --time=00:30:00
#SBATCH --nodes=1
#SBATCH --ntasks-per-node=10
#SBATCH --cpus-per-task=1
#SBATCH --output=ray_%A.out
module load ray/2.3.1
srun --mpi=pmi2 -n 10 Ray -o test -p test_file_1.fastq test_file_2.fastq -k 31
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Example 2: Using five nodes, with sixteen tasks per node (one core per task). Notice that the srun -n option is set to 5 * 16 = 80:
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#!/bin/bash
#SBATCH --account=type-your-project-name
#SBATCH --time=00:10:00
#SBATCH --nodes=5
#SBATCH --ntasks-per-node=16
#SBATCH --cpus-per-task=1
#SBATCH --output=ray_%A.out
module load ray/2.3.1
srun --mpi=pmi2 -n 80 Ray -o test -p test_file_1.fastq test_file_2.fastq -k 31 |
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