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Last Updated: 11/12/24

application

Astral

Bam-countread

Bcftools

Beast1

Beast2

Blast

Bowtie2

Dorado

Fastp

FastQC

Gaussian & GaussView

Guppy (CPU)

Guppy (GPU)

Hisat2

IDL

IQ-Tree

MAFFT

MATLAB

MultiQC

Muscle

Nextflow

ParaView

Picard

Qiime2

RegTools

RSeQC

Samtools

SPAdes

Subread

TopHat

Trimmomatic

compiler

GNU

Intel oneAPI

NVidia HPC SDK

containers and virtual envs

Apptainer

Miniconda

ide

PyCharm

RStudio

Visual Studio Code

language

C/C++

Fortran

Go

Java

Julia

Perl

Python2

Python3

R

Rust

...